PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS67626.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 126aa    MW: 14348.6 Da    PI: 10.8593
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS67626.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH54.32.5e-172369455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 hn+ ErrRRdriN+++  L+el+P+a      K +Ka++L +A+eY+ksLq
  EPS67626.1 23 VHNQSERRRRDRINEKMRALQELIPHA-----HKSDKASMLDEAIEYMKSLQ 69
                5*************************9.....6******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.6E-191676IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-201686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.3521968IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.18E-152273No hitNo description
PfamPF000109.7E-152369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.8E-172574IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
DSPGGRNSRN PQKSSRKTRI AEVHNQSERR RRDRINEKMR ALQELIPHAH KSDKASMLDE  60
AIEYMKSLQL QLQWLWMGSG MPQMMLPRAL HYIYHSGMAM SSPMQSLMSG LPLVGQAMTH  120
PPPGSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12732ERRRRD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100371.19e-45PREDICTED: transcription factor PIF4
RefseqXP_011100372.19e-45PREDICTED: transcription factor PIF4
SwissprotO805369e-30PIF3_ARATH; Transcription factor PIF3
TrEMBLS8CRY14e-88S8CRY1_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc07g043580.2.16e-38(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA104652226
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.25e-31phytochrome interacting factor 3
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]